docs: implement user feedback from tasks.txt

- README.md: Fixed .env step order, updated to 60+ services
- getting-started.md: Service count updates, credential clarifications, moved Manual Setup to separate file
- manual-setup.md: Created comprehensive manual setup guide
- authelia-customization.md: Moved Authelia customization from services-overview
- services-overview.md: Added clickable links to service docs, removed disabled section and Quick Deployment
- quick-reference.md: Linked to scripts/README.md instead of duplicating content
- Removed services-reference.md as requested

docs/getting-started.md

@@ -1,6 +1,6 @@
 # Getting Started Guide
 
-Welcome to your AI-powered homelab! This guide will walk you through setting up your production-ready infrastructure with Dockge, Traefik, Authelia, and 40+ services.
+Welcome to your AI-powered homelab! This guide will walk you through setting up your production-ready infrastructure with Dockge, Traefik, Authelia, and 60+ services.
 
 ## Quick Setup (Recommended)
 
@@ -36,7 +36,7 @@ For most users, the automated setup script handles everything:
    - `ACME_EMAIL` - Your email for Let's Encrypt certificates
    - `SURFSHARK_USERNAME` and `SURFSHARK_PASSWORD` - If using VPN
    
-   **Note:** The `.env` file stays in the repository folder (`~/AI-Homelab/.env`). The deploy script copies it to stack directories automatically. Authelia secrets are generated by the setup script.
+   **Note:** The `.env` file stays in the repository folder (`~/AI-Homelab/.env`). The deploy script copies it to stack directories automatically. Authelia secrets (JWT, session, encryption key) are auto-generated by the setup script - leave them with default values for now.
 
 5. **Run the setup script:**
    ```bash
@@ -56,8 +56,6 @@ For most users, the automated setup script handles everything:
    - Set up Docker networks (homelab, traefik, dockerproxy, media)
    - Detect NVIDIA GPU and offer driver installation
    
-   **Important:** The script generates a secure admin password hash that will be used during deployment. Credentials are displayed at the end and saved to a temporary file.
-   
 6. **Log out and back in** (or run `newgrp docker`)
    > Don't skip this step! Required for Docker group permissions.
 
@@ -76,8 +74,8 @@ For most users, the automated setup script handles everything:
    - Opens Dockge in your browser
    
    **Login credentials:**
-   - Username: `admin`
-   - Password: Check `/opt/stacks/core/authelia/ADMIN_PASSWORD.txt` or see script output
+   - Username: `admin` (default username - or the custom username you specified during setup)
+   - Password: The secure password you created when prompted by the setup script
 
 **That's it!** Your homelab is ready. Access Dockge at `https://dockge.yourdomain.duckdns.org`
 
@@ -116,97 +114,30 @@ The `setup-homelab.sh` script is a comprehensive first-run configuration tool:
 
 ## Manual Setup (Alternative)
 
-If you prefer manual control or the script fails, follow these steps:
+If you prefer manual control or the automated script fails, see the [Manual Setup Guide](manual-setup.md) for step-by-step instructions on installing Docker, configuring services, and deploying the homelab manually.
 
-### Step 1: System Preparation
-```bash
-# Update system
-sudo apt update && sudo apt upgrade -y
-
-# Install required packages
-sudo apt install -y curl wget git ufw openssh-server
-
-# Enable firewall
-sudo ufw allow ssh
-sudo ufw allow 80/tcp
-sudo ufw allow 443/tcp
-sudo ufw --force enable
-```
-
-### Step 2: Install Docker
-```bash
-# Install Docker
-curl -fsSL https://get.docker.com -o get-docker.sh
-sudo sh get-docker.sh
-
-# Add user to docker group
-sudo usermod -aG docker $USER
-sudo usermod -aG sudo $USER
-
-# Log out and back in, or run: newgrp docker
-```
-
-### Step 3: Clone Repository
-```bash
-cd ~
-git clone https://github.com/kelinfoxy/AI-Homelab.git
-cd AI-Homelab
-```
-
-### Step 4: Configure Environment
-```bash
-cp .env.example .env
-nano .env  # Edit all required variables
-```
-
-### Step 5: Create Infrastructure
-```bash
-# Create directories
-sudo mkdir -p /opt/stacks /mnt/{media,database,downloads,backups}
-sudo chown -R $USER:$USER /opt/stacks /mnt
-
-# Create networks
-docker network create traefik-network
-docker network create homelab-network
-docker network create media-network
-```
-
-### Step 6: Deploy Services
-```bash
-# Deploy core infrastructure
-sudo mkdir -p /opt/stacks/core
-cp docker-compose/core.yml /opt/stacks/core/
-cp -r config-templates/traefik /opt/stacks/core/
-cp -r config-templates/authelia /opt/stacks/core/
-cp .env /opt/stacks/core/
-cd /opt/stacks/core
-docker compose up -d
-
-# Deploy infrastructure stack
-sudo mkdir -p /opt/stacks/infrastructure
-cp ../docker-compose/infrastructure.yml /opt/stacks/infrastructure/
-cp ../.env /opt/stacks/infrastructure/
-cd /opt/stacks/infrastructure
-docker compose up -d
-```
-
-## Post-Setup Configuration
+## Post-Setup Next Steps
 
 ### Access Your Services
 - **Dockge**: `https://dockge.yourdomain.duckdns.org`
 - **Authelia**: `https://auth.yourdomain.duckdns.org`
 - **Traefik**: `https://traefik.yourdomain.duckdns.org`
 
-### Configure Authelia
+### Set Up 2FA with Authelia
 1. Access `https://auth.yourdomain.duckdns.org`
 2. Set up your admin user
 3. Configure 2FA for security
 
 ### Deploy Additional Stacks
 Use Dockge to deploy stacks like:
-- `dashboards.yml` - Homepage and Homarr
-- `media.yml` - Plex, Jellyfin, Sonarr, Radarr
-- `productivity.yml` - Nextcloud, Gitea, wikis
+- `arr-apps.yml` - Media management (Radarr, Sonarr, Prowlarr, etc.)
+- `media-servers.yml` - Plex and Jellyfin
+- `downloaders.yml` - qBittorrent, Transmission, etc.
+- `monitoring.yml` - Uptime Kuma and metrics
+- `system-tools.yml` - Utility services
+- `automation.yml` - Automated workflows
+
+**Note:** The dashboards stack (Homepage and Homarr) is already deployed during initial setup.
 
 ### Set Up Homepage Widgets
 1. Access Homepage dashboard
@@ -236,6 +167,7 @@ Use Dockge to deploy stacks like:
   - View logs: `docker exec traefik tail -50 /var/log/traefik/traefik.log | grep certificate`
 - **Authelia login fails**: Check user database configuration at `/opt/stacks/core/authelia/users_database.yml`
 - **"Not secure" warnings**: Clear browser cache or wait for DNS propagation (up to 5 minutes)
+- **Check logs**: Use Dozzle web interface at `https://dozzle.yourdomain.duckdns.org` or run `docker logs <container-name>`
 
 ### Common Fixes
 ```bash